Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.53□□□□□ -0.4
SftpbP50405 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.53□□□□□ -0.4
SftpbP50405 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SftpbP50405 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SftpbP50405 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.53□□□□□ -0.4
SftpbP50405 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.53□□□□□ -0.4
SftpbP50405 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.53□□□□□ -0.4
SftpbP50405 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SftpbP50405 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.53□□□□□ -0.4
SftpbP50405 Gm5904-201ENSMUST00000210286 865 ntBASIC12.53□□□□□ -0.4
SftpbP50405 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SftpbP50405 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.53□□□□□ -0.4
SftpbP50405 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SftpbP50405 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.52□□□□□ -0.4
SftpbP50405 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SftpbP50405 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SftpbP50405 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.52□□□□□ -0.41
SftpbP50405 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.52□□□□□ -0.41
SftpbP50405 Gm8018-201ENSMUST00000173536 789 ntBASIC12.52□□□□□ -0.41
SftpbP50405 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SftpbP50405 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.52□□□□□ -0.41
SftpbP50405 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.52□□□□□ -0.41
SftpbP50405 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpbP50405 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpbP50405 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SftpbP50405 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.52□□□□□ -0.41
SftpbP50405 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SftpbP50405 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SftpbP50405 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SftpbP50405 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SftpbP50405 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Gm29127-201ENSMUST00000188304 517 ntBASIC12.51□□□□□ -0.41
SftpbP50405 Gm43818-201ENSMUST00000200605 466 ntBASIC12.51□□□□□ -0.41
SftpbP50405 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SftpbP50405 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms