Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Gm28071-201ENSMUST00000190355 478 ntBASIC11.61□□□□□ -0.55
Nkx2-6P43688 Gm18038-201ENSMUST00000197900 485 ntBASIC11.61□□□□□ -0.55
Nkx2-6P43688 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.61□□□□□ -0.55
Nkx2-6P43688 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-6P43688 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.6□□□□□ -0.55
Nkx2-6P43688 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.6□□□□□ -0.55
Nkx2-6P43688 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.6□□□□□ -0.55
Nkx2-6P43688 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.6□□□□□ -0.55
Nkx2-6P43688 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx2-6P43688 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-6P43688 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms