Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sox18P43680 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Sox18P43680 Mir1901-201ENSMUST00000122616 78 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.93□□□□□ -0.5
Sox18P43680 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox18P43680 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Gm18038-201ENSMUST00000197900 485 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox18P43680 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Gm9132-201ENSMUST00000210182 832 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Gm45398-201ENSMUST00000210561 165 ntBASIC11.93□□□□□ -0.5
Sox18P43680 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox18P43680 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Olfr1153-201ENSMUST00000052300 957 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Ginm1-202ENSMUST00000065124 300 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC11.93□□□□□ -0.5
Sox18P43680 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox18P43680 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox18P43680 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox18P43680 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.92□□□□□ -0.5
Sox18P43680 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sox18P43680 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox18P43680 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Sox18P43680 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox18P43680 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox18P43680 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox18P43680 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Gm9230-201ENSMUST00000188228 532 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Gm28455-201ENSMUST00000189105 1290 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Gm18352-201ENSMUST00000189113 902 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Gm37246-201ENSMUST00000192665 835 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Gm37213-201ENSMUST00000193077 586 ntBASIC11.92□□□□□ -0.5
Sox18P43680 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox18P43680 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox18P43680 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms