Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.1□□□□□ -0.79
Timp3P39876 Gm13665-201ENSMUST00000120830 528 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.1□□□□□ -0.79
Timp3P39876 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
Timp3P39876 Gm8018-201ENSMUST00000173536 789 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Timp3P39876 Gm3096-201ENSMUST00000185770 364 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Gm5363-201ENSMUST00000211927 938 ntBASIC10.1□□□□□ -0.79
Timp3P39876 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.1□□□□□ -0.79
Timp3P39876 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Timp3P39876 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Timp3P39876 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Gm23270-201ENSMUST00000104055 131 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.09□□□□□ -0.79
Timp3P39876 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.09□□□□□ -0.79
Timp3P39876 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Gm2383-201ENSMUST00000181461 807 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Gm27046-201ENSMUST00000182160 463 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Gm37201-201ENSMUST00000191845 523 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Gm38317-201ENSMUST00000195564 343 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.09□□□□□ -0.79
Timp3P39876 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.09□□□□□ -0.79
Timp3P39876 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.09□□□□□ -0.79
Timp3P39876 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Timp3P39876 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.09□□□□□ -0.79
Timp3P39876 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Timp3P39876 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.08□□□□□ -0.8
Timp3P39876 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Timp3P39876 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.08□□□□□ -0.8
Timp3P39876 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Timp3P39876 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms