Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh4P39038 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.76□□□□□ -0.53
Cdh4P39038 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.76□□□□□ -0.53
Cdh4P39038 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.76□□□□□ -0.53
Cdh4P39038 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.76□□□□□ -0.53
Cdh4P39038 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh4P39038 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh4P39038 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh4P39038 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdh4P39038 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm14109-201ENSMUST00000118814 309 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm25668-201ENSMUST00000157700 129 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh4P39038 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdh4P39038 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.75□□□□□ -0.53
Cdh4P39038 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh4P39038 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms