Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.28□□□□□ -0.6
Nedd8P29595 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm14494-201ENSMUST00000118786 435 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.28□□□□□ -0.6
Nedd8P29595 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm25144-201ENSMUST00000179561 110 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Gm25352-201ENSMUST00000179815 110 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm7774-201ENSMUST00000200064 533 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nedd8P29595 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.28□□□□□ -0.6
Nedd8P29595 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nedd8P29595 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Nedd8P29595 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.27□□□□□ -0.6
Nedd8P29595 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Nedd8P29595 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nedd8P29595 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nedd8P29595 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nedd8P29595 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Gm14350-201ENSMUST00000116642 640 ntBASIC11.27□□□□□ -0.61
Nedd8P29595 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.27□□□□□ -0.61
Nedd8P29595 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.27□□□□□ -0.61
Nedd8P29595 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.27□□□□□ -0.61
Nedd8P29595 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.27□□□□□ -0.61
Nedd8P29595 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nedd8P29595 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nedd8P29595 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms