Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp3P28862 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp3P28862 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp3P28862 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Mmp3P28862 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.09□□□□□ -0.31
Mmp3P28862 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Gm5419-201ENSMUST00000119301 527 ntBASIC13.09□□□□□ -0.31
Mmp3P28862 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.09□□□□□ -0.31
Mmp3P28862 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.09□□□□□ -0.31
Mmp3P28862 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Mmp3P28862 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 Gm24514-201ENSMUST00000174961 285 ntBASIC13.09□□□□□ -0.31
Mmp3P28862 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 Gm37246-201ENSMUST00000192665 835 ntBASIC13.09□□□□□ -0.31
Mmp3P28862 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 Gm1821-202ENSMUST00000227415 750 ntBASIC13.09□□□□□ -0.31
Mmp3P28862 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Mmp3P28862 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp3P28862 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Mmp3P28862 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.08□□□□□ -0.31
Mmp3P28862 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.08□□□□□ -0.31
Mmp3P28862 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.31
Mmp3P28862 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Mmp3P28862 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Mmp3P28862 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Mmp3P28862 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Gm12857-201ENSMUST00000117678 592 ntBASIC13.08□□□□□ -0.32
Mmp3P28862 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.08□□□□□ -0.32
Mmp3P28862 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.08□□□□□ -0.32
Mmp3P28862 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Mmp3P28862 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.08□□□□□ -0.32
Mmp3P28862 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Mmp3P28862 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Mmp3P28862 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Mmp3P28862 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Mmp3P28862 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Mmp3P28862 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp3P28862 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.07□□□□□ -0.32
Mmp3P28862 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp3P28862 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms