Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.31□□□□□ -0.44
RxrbP28704 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RxrbP28704 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RxrbP28704 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.31□□□□□ -0.44
RxrbP28704 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RxrbP28704 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RxrbP28704 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RxrbP28704 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Gm11814-201ENSMUST00000119515 929 ntBASIC12.3□□□□□ -0.44
RxrbP28704 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.3□□□□□ -0.44
RxrbP28704 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.3□□□□□ -0.44
RxrbP28704 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RxrbP28704 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.3□□□□□ -0.44
RxrbP28704 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Gm45384-201ENSMUST00000210451 277 ntBASIC12.3□□□□□ -0.44
RxrbP28704 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RxrbP28704 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RxrbP28704 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.3□□□□□ -0.44
RxrbP28704 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RxrbP28704 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RxrbP28704 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RxrbP28704 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.29□□□□□ -0.44
RxrbP28704 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Gm11439-201ENSMUST00000118598 409 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Gm11964-201ENSMUST00000120982 444 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Gm26185-201ENSMUST00000157692 266 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Gm6244-201ENSMUST00000178732 841 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RxrbP28704 Gm37042-201ENSMUST00000193816 581 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Gm9908-201ENSMUST00000211534 448 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms