Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.25□□□□□ -0.45
Nckap1P28660 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Nckap1P28660 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nckap1P28660 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nckap1P28660 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Gm22133-201ENSMUST00000102082 109 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nckap1P28660 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.24□□□□□ -0.45
Nckap1P28660 Gm15711-201ENSMUST00000118889 535 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nckap1P28660 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nckap1P28660 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nckap1P28660 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Gm37666-201ENSMUST00000194110 866 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.24□□□□□ -0.45
Nckap1P28660 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.24□□□□□ -0.45
Nckap1P28660 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nckap1P28660 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Nckap1P28660 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nckap1P28660 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.23□□□□□ -0.45
Nckap1P28660 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.23□□□□□ -0.45
Nckap1P28660 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nckap1P28660 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nckap1P28660 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.23□□□□□ -0.45
Nckap1P28660 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.23□□□□□ -0.45
Nckap1P28660 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.23□□□□□ -0.45
Nckap1P28660 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.23□□□□□ -0.45
Nckap1P28660 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nckap1P28660 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nckap1P28660 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nckap1P28660 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nckap1P28660 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nckap1P28660 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nckap1P28660 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nckap1P28660 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.22□□□□□ -0.45
Nckap1P28660 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.22□□□□□ -0.45
Nckap1P28660 Gm14263-201ENSMUST00000117955 746 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms