Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.78□□□□□ -0.52
Cntn1P12960 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.78□□□□□ -0.52
Cntn1P12960 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cntn1P12960 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.78□□□□□ -0.52
Cntn1P12960 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.78□□□□□ -0.52
Cntn1P12960 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cntn1P12960 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cntn1P12960 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.77□□□□□ -0.53
Cntn1P12960 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cntn1P12960 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Cntn1P12960 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn1P12960 Gm14028-201ENSMUST00000117434 479 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cntn1P12960 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.77□□□□□ -0.53
Cntn1P12960 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cntn1P12960 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Gm9230-201ENSMUST00000188228 532 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Gm18827-201ENSMUST00000188341 790 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn1P12960 Gm8385-201ENSMUST00000058999 643 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cntn1P12960 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.77□□□□□ -0.53
Cntn1P12960 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cntn1P12960 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cntn1P12960 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.77□□□□□ -0.53
Cntn1P12960 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cntn1P12960 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cntn1P12960 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cntn1P12960 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cntn1P12960 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.76□□□□□ -0.53
Cntn1P12960 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.76□□□□□ -0.53
Cntn1P12960 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cntn1P12960 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms