Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm26134-201ENSMUST00000178484 110 ntBASIC14.19□□□□□ -0.14
Col1a1P11087 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Col1a1P11087 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.19□□□□□ -0.14
Col1a1P11087 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col1a1P11087 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.19□□□□□ -0.14
Col1a1P11087 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col1a1P11087 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col1a1P11087 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col1a1P11087 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.19□□□□□ -0.14
Col1a1P11087 Gm15610-201ENSMUST00000120584 195 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Col1a1P11087 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm37981-201ENSMUST00000194280 535 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col1a1P11087 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm25545-201ENSMUST00000122673 323 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.18□□□□□ -0.14
Col1a1P11087 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 Gm6722-201ENSMUST00000221586 390 ntBASIC14.18□□□□□ -0.14
Col1a1P11087 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col1a1P11087 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col1a1P11087 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col1a1P11087 Gm12030-201ENSMUST00000121917 223 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Gm5621-201ENSMUST00000187303 640 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Gm44315-201ENSMUST00000203041 219 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col1a1P11087 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col1a1P11087 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col1a1P11087 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Olfr584-201ENSMUST00000098210 964 ntBASIC14.17□□□□□ -0.14
Col1a1P11087 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col1a1P11087 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col1a1P11087 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col1a1P11087 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms