Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm5370-201ENSMUST00000187187 574 ntBASIC11.49□□□□□ -0.57
Nid1P10493 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.49□□□□□ -0.57
Nid1P10493 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.49□□□□□ -0.57
Nid1P10493 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.49□□□□□ -0.57
Nid1P10493 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.49□□□□□ -0.57
Nid1P10493 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Nid1P10493 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nid1P10493 Gm9396-201ENSMUST00000076703 567 ntBASIC11.49□□□□□ -0.57
Nid1P10493 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.49□□□□□ -0.57
Nid1P10493 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nid1P10493 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nid1P10493 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nid1P10493 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.49□□□□□ -0.57
Nid1P10493 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nid1P10493 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nid1P10493 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nid1P10493 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Nid1P10493 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Nid1P10493 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nid1P10493 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.48□□□□□ -0.57
Nid1P10493 Gm5187-201ENSMUST00000117317 991 ntBASIC11.48□□□□□ -0.57
Nid1P10493 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Nid1P10493 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Gm2546-201ENSMUST00000182630 991 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.48□□□□□ -0.57
Nid1P10493 Gm18187-201ENSMUST00000196476 984 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Gm43133-201ENSMUST00000197472 463 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Gm18711-201ENSMUST00000199341 750 ntBASIC11.48□□□□□ -0.57
Nid1P10493 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nid1P10493 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.48□□□□□ -0.57
Nid1P10493 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
Nid1P10493 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.48□□□□□ -0.57
Nid1P10493 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.48□□□□□ -0.57
Nid1P10493 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nid1P10493 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nid1P10493 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nid1P10493 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nid1P10493 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.47□□□□□ -0.57
Nid1P10493 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nid1P10493 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nid1P10493 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nid1P10493 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms