Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UbbP0CG49 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
UbbP0CG49 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.67□□□□□ -0.7
UbbP0CG49 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UbbP0CG49 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
UbbP0CG49 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm13492-201ENSMUST00000119772 665 ntBASIC10.67□□□□□ -0.7
UbbP0CG49 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.67□□□□□ -0.7
UbbP0CG49 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UbbP0CG49 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.67□□□□□ -0.7
UbbP0CG49 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.67□□□□□ -0.7
UbbP0CG49 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm19163-201ENSMUST00000223313 780 ntBASIC10.67□□□□□ -0.7
UbbP0CG49 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UbbP0CG49 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UbbP0CG49 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.67□□□□□ -0.7
UbbP0CG49 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.67□□□□□ -0.7
UbbP0CG49 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UbbP0CG49 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
UbbP0CG49 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.66□□□□□ -0.7
UbbP0CG49 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm12203-201ENSMUST00000118235 598 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 Gm12209-201ENSMUST00000120089 596 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm8810-201ENSMUST00000172895 754 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
UbbP0CG49 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.66□□□□□ -0.7
UbbP0CG49 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
UbbP0CG49 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
UbbP0CG49 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.65□□□□□ -0.7
UbbP0CG49 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.65□□□□□ -0.7
UbbP0CG49 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
UbbP0CG49 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
UbbP0CG49 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
UbbP0CG49 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.65□□□□□ -0.7
UbbP0CG49 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms