Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm8737-201ENSMUST00000122208 642 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm18367-201ENSMUST00000176139 600 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm29499-201ENSMUST00000189151 486 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm28329-201ENSMUST00000191208 689 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm29171-201ENSMUST00000191397 486 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm37905-201ENSMUST00000195310 341 ntBASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hoxc9P09633 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hoxc9P09633 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm15610-201ENSMUST00000120584 195 ntBASIC15.79■□□□□ 0.12
Hoxc9P09633 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm38210-201ENSMUST00000191944 809 ntBASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm34023-201ENSMUST00000195539 217 ntBASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm43058-201ENSMUST00000197645 625 ntBASIC15.79■□□□□ 0.12
Hoxc9P09633 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.79■□□□□ 0.12
Hoxc9P09633 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hoxc9P09633 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Hoxc9P09633 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Hoxc9P09633 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm11836-201ENSMUST00000121022 441 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 Mir1901-201ENSMUST00000122616 78 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm4654-201ENSMUST00000183305 982 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.78■□□□□ 0.12
Hoxc9P09633 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms