Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm24136-201ENSMUST00000083374 165 ntBASIC11.24□□□□□ -0.61
P01852 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.24□□□□□ -0.61
P01852 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
P01852 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.24□□□□□ -0.61
P01852 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.24□□□□□ -0.61
P01852 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P01852 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.24□□□□□ -0.61
P01852 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.23□□□□□ -0.61
P01852 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
P01852 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Gm25668-201ENSMUST00000157700 129 ntBASIC11.23□□□□□ -0.61
P01852 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Gm9022-201ENSMUST00000182482 992 ntBASIC11.23□□□□□ -0.61
P01852 Gm28882-201ENSMUST00000185504 314 ntBASIC11.23□□□□□ -0.61
P01852 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.23□□□□□ -0.61
P01852 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.23□□□□□ -0.61
P01852 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.23□□□□□ -0.61
P01852 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P01852 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.23□□□□□ -0.61
P01852 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.23□□□□□ -0.61
P01852 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.23□□□□□ -0.61
P01852 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.23□□□□□ -0.61
P01852 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.23□□□□□ -0.61
P01852 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P01852 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.23□□□□□ -0.61
P01852 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.23□□□□□ -0.61
P01852 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
P01852 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.23□□□□□ -0.61
P01852 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P01852 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.22□□□□□ -0.61
P01852 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Gm14832-201ENSMUST00000121289 322 ntBASIC11.22□□□□□ -0.61
P01852 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
P01852 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.22□□□□□ -0.61
P01852 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Gm3096-201ENSMUST00000185770 364 ntBASIC11.22□□□□□ -0.61
P01852 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.22□□□□□ -0.61
P01852 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.22□□□□□ -0.61
P01852 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.22□□□□□ -0.61
P01852 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms