Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.95□□□□□ -0.98
TcraP01849 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
TcraP01849 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.95□□□□□ -0.98
TcraP01849 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.95□□□□□ -0.98
TcraP01849 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.95□□□□□ -0.98
TcraP01849 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Gm24694-201ENSMUST00000180054 110 ntBASIC8.95□□□□□ -0.98
TcraP01849 Gm27663-201ENSMUST00000184839 110 ntBASIC8.95□□□□□ -0.98
TcraP01849 Mir7023-201ENSMUST00000185093 64 ntBASIC8.95□□□□□ -0.98
TcraP01849 Gm29608-201ENSMUST00000190444 463 ntBASIC8.95□□□□□ -0.98
TcraP01849 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC8.95□□□□□ -0.98
TcraP01849 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
TcraP01849 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 AC155258.1-201ENSMUST00000219303 253 ntBASIC8.95□□□□□ -0.98
TcraP01849 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Gm4735-201ENSMUST00000138679 1302 ntBASIC8.95□□□□□ -0.98
TcraP01849 Gm5855-201ENSMUST00000200240 1305 ntBASIC8.95□□□□□ -0.98
TcraP01849 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC8.95□□□□□ -0.98
TcraP01849 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.95□□□□□ -0.98
TcraP01849 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TcraP01849 Gm36957-201ENSMUST00000192982 2824 ntBASIC8.95□□□□□ -0.98
TcraP01849 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TcraP01849 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gm14132-201ENSMUST00000117188 1719 ntBASIC8.94□□□□□ -0.98
TcraP01849 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
TcraP01849 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 AC169511.2-201ENSMUST00000226674 2063 ntBASIC8.94□□□□□ -0.98
TcraP01849 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gm11524-201ENSMUST00000119349 807 ntBASIC8.94□□□□□ -0.98
TcraP01849 Gm14719-201ENSMUST00000121891 340 ntBASIC8.94□□□□□ -0.98
TcraP01849 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC8.94□□□□□ -0.98
TcraP01849 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC8.94□□□□□ -0.98
TcraP01849 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
TcraP01849 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC8.94□□□□□ -0.98
TcraP01849 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.94□□□□□ -0.98
TcraP01849 Gm5279-201ENSMUST00000199575 745 ntBASIC8.94□□□□□ -0.98
TcraP01849 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.94□□□□□ -0.98
TcraP01849 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.94□□□□□ -0.98
TcraP01849 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
TcraP01849 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms