Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.63□□□□□ -0.39
CopeO89079 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.63□□□□□ -0.39
CopeO89079 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CopeO89079 Gm11814-201ENSMUST00000119515 929 ntBASIC12.63□□□□□ -0.39
CopeO89079 Gm13315-201ENSMUST00000120376 991 ntBASIC12.63□□□□□ -0.39
CopeO89079 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Gm18304-201ENSMUST00000189162 546 ntBASIC12.63□□□□□ -0.39
CopeO89079 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.63□□□□□ -0.39
CopeO89079 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.63□□□□□ -0.39
CopeO89079 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Gm6180-201ENSMUST00000065243 498 ntBASIC12.63□□□□□ -0.39
CopeO89079 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CopeO89079 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CopeO89079 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CopeO89079 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CopeO89079 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.62□□□□□ -0.39
CopeO89079 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CopeO89079 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.62□□□□□ -0.39
CopeO89079 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.62□□□□□ -0.39
CopeO89079 Gm9083-201ENSMUST00000120423 819 ntBASIC12.62□□□□□ -0.39
CopeO89079 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.62□□□□□ -0.39
CopeO89079 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.62□□□□□ -0.39
CopeO89079 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.62□□□□□ -0.39
CopeO89079 Gm23119-201ENSMUST00000158610 140 ntBASIC12.62□□□□□ -0.39
CopeO89079 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Gm8018-201ENSMUST00000173536 789 ntBASIC12.62□□□□□ -0.39
CopeO89079 Gm8652-201ENSMUST00000181363 964 ntBASIC12.62□□□□□ -0.39
CopeO89079 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Gm9908-201ENSMUST00000211534 448 ntBASIC12.62□□□□□ -0.39
CopeO89079 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CopeO89079 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CopeO89079 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.61□□□□□ -0.39
CopeO89079 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.61□□□□□ -0.39
CopeO89079 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CopeO89079 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CopeO89079 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.61□□□□□ -0.39
CopeO89079 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms