Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.56□□□□□ -0.56
Matn4O89029 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.56□□□□□ -0.56
Matn4O89029 Gm18584-201ENSMUST00000203098 964 ntBASIC11.56□□□□□ -0.56
Matn4O89029 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.56□□□□□ -0.56
Matn4O89029 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.56□□□□□ -0.56
Matn4O89029 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.56□□□□□ -0.56
Matn4O89029 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Matn4O89029 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Matn4O89029 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.55□□□□□ -0.56
Matn4O89029 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.55□□□□□ -0.56
Matn4O89029 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Matn4O89029 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Matn4O89029 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Matn4O89029 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Gm5904-201ENSMUST00000210286 865 ntBASIC11.55□□□□□ -0.56
Matn4O89029 Gm5781-201ENSMUST00000219792 443 ntBASIC11.55□□□□□ -0.56
Matn4O89029 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Matn4O89029 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.55□□□□□ -0.56
Matn4O89029 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Matn4O89029 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.54□□□□□ -0.56
Matn4O89029 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Matn4O89029 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Matn4O89029 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Matn4O89029 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.54□□□□□ -0.56
Matn4O89029 Gm16177-201ENSMUST00000120728 718 ntBASIC11.54□□□□□ -0.56
Matn4O89029 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Gm29649-201ENSMUST00000185649 419 ntBASIC11.54□□□□□ -0.56
Matn4O89029 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.54□□□□□ -0.56
Matn4O89029 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.54□□□□□ -0.56
Matn4O89029 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.54□□□□□ -0.56
Matn4O89029 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Matn4O89029 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms