Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.15□□□□□ -0.46
Pdlim1O70400 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm38317-201ENSMUST00000195564 343 ntBASIC12.15□□□□□ -0.46
Pdlim1O70400 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Pdlim1O70400 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim1O70400 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim1O70400 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.15□□□□□ -0.47
Pdlim1O70400 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim1O70400 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim1O70400 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.15□□□□□ -0.47
Pdlim1O70400 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim1O70400 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm5070-201ENSMUST00000177599 862 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.14□□□□□ -0.47
Pdlim1O70400 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdlim1O70400 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim1O70400 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim1O70400 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim1O70400 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pdlim1O70400 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim1O70400 Gm13665-201ENSMUST00000120830 528 ntBASIC12.13□□□□□ -0.47
Pdlim1O70400 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Pdlim1O70400 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim1O70400 Rprl1-201ENSMUST00000158050 327 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms