Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.36□□□□□ -0.43
Chrna4O70174 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Chrna4O70174 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.36□□□□□ -0.43
Chrna4O70174 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Chrna4O70174 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chrna4O70174 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.36□□□□□ -0.43
Chrna4O70174 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chrna4O70174 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chrna4O70174 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chrna4O70174 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Chrna4O70174 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Chrna4O70174 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chrna4O70174 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Chrna4O70174 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm11222-201ENSMUST00000119005 738 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm9996-201ENSMUST00000070359 913 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chrna4O70174 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.35□□□□□ -0.43
Chrna4O70174 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chrna4O70174 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.34□□□□□ -0.43
Chrna4O70174 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms