Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Efnb3O35393 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Efnb3O35393 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.7□□□□□ -0.86
Efnb3O35393 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Efnb3O35393 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Efnb3O35393 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Efnb3O35393 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Efnb3O35393 Mir1894-201ENSMUST00000122802 81 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.69□□□□□ -0.86
Efnb3O35393 Rmrp-201ENSMUST00000157463 271 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.69□□□□□ -0.86
Efnb3O35393 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.69□□□□□ -0.86
Efnb3O35393 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Efnb3O35393 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm7287-201ENSMUST00000205267 602 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.69□□□□□ -0.86
Efnb3O35393 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm24136-201ENSMUST00000083374 165 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Efnb3O35393 Gm5356-201ENSMUST00000093326 615 ntBASIC9.69□□□□□ -0.86
Efnb3O35393 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Efnb3O35393 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Gm16479-201ENSMUST00000121706 932 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm27892-201ENSMUST00000185017 106 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm37042-201ENSMUST00000193816 581 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms