Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr1aO35134 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr1aO35134 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
Polr1aO35134 Gm10169-201ENSMUST00000121822 348 ntBASIC18.52■□□□□ 0.55
Polr1aO35134 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr1aO35134 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC18.52■□□□□ 0.55
Polr1aO35134 Gm22877-201ENSMUST00000175451 105 ntBASIC18.52■□□□□ 0.55
Polr1aO35134 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Polr1aO35134 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Polr1aO35134 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Polr1aO35134 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC18.52■□□□□ 0.55
Polr1aO35134 Gm18968-201ENSMUST00000221319 862 ntBASIC18.52■□□□□ 0.55
Polr1aO35134 AC122346.3-201ENSMUST00000223983 306 ntBASIC18.52■□□□□ 0.55
Polr1aO35134 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Gm38089-201ENSMUST00000193585 1514 ntBASIC18.51■□□□□ 0.55
Polr1aO35134 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC18.51■□□□□ 0.55
Polr1aO35134 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC18.51■□□□□ 0.55
Polr1aO35134 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Polr1aO35134 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC18.51■□□□□ 0.55
Polr1aO35134 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 AC153929.1-201ENSMUST00000219009 303 ntBASIC18.51■□□□□ 0.55
Polr1aO35134 CT010506.1-201ENSMUST00000223673 349 ntBASIC18.51■□□□□ 0.55
Polr1aO35134 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr1aO35134 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC18.51■□□□□ 0.55
Polr1aO35134 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Polr1aO35134 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm15784-201ENSMUST00000120260 1462 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm11801-201ENSMUST00000117807 746 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Gm14395-201ENSMUST00000120494 563 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC18.5■□□□□ 0.55
Polr1aO35134 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Polr1aO35134 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Polr1aO35134 Gm18642-201ENSMUST00000206642 1400 ntBASIC18.5■□□□□ 0.55
Polr1aO35134 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr1aO35134 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.49■□□□□ 0.55
Polr1aO35134 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Polr1aO35134 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC18.49■□□□□ 0.55
Polr1aO35134 Gm18059-201ENSMUST00000208073 580 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Polr1aO35134 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Polr1aO35134 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC18.49■□□□□ 0.55
Polr1aO35134 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Polr1aO35134 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr1aO35134 Gm20392-201ENSMUST00000173047 701 ntBASIC18.49■□□□□ 0.55
Polr1aO35134 Gm17825-201ENSMUST00000206836 794 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms