Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ebf3O08791 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.77□□□□□ -0.37
Ebf3O08791 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.77□□□□□ -0.37
Ebf3O08791 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.77□□□□□ -0.37
Ebf3O08791 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.77□□□□□ -0.37
Ebf3O08791 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ebf3O08791 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.77□□□□□ -0.37
Ebf3O08791 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ebf3O08791 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ebf3O08791 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.77□□□□□ -0.37
Ebf3O08791 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ebf3O08791 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf3O08791 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ebf3O08791 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ebf3O08791 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.76□□□□□ -0.37
Ebf3O08791 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.76□□□□□ -0.37
Ebf3O08791 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm17040-202ENSMUST00000170597 889 ntBASIC12.76□□□□□ -0.37
Ebf3O08791 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.76□□□□□ -0.37
Ebf3O08791 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm19187-201ENSMUST00000206781 892 ntBASIC12.76□□□□□ -0.37
Ebf3O08791 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.76□□□□□ -0.37
Ebf3O08791 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Ebf3O08791 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Ebf3O08791 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf3O08791 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.76□□□□□ -0.37
Ebf3O08791 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ebf3O08791 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf3O08791 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf3O08791 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Gm12314-201ENSMUST00000118104 538 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Gm12266-201ENSMUST00000120311 962 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ebf3O08791 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf3O08791 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ebf3O08791 Gm29615-201ENSMUST00000185371 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm28224-201ENSMUST00000186078 697 ntBASIC12.75□□□□□ -0.37
Ebf3O08791 Gm29001-201ENSMUST00000186177 697 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms