Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Gm7224-201ENSMUST00000121359 2066 ntBASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcf11G3X9Z4 Gm12795-201ENSMUST00000117594 539 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm17825-201ENSMUST00000206836 794 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm6108-201ENSMUST00000208365 367 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Zfp125-201ENSMUST00000079237 2488 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm1848-201ENSMUST00000120711 789 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm37981-201ENSMUST00000194280 535 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 AC122350.1-201ENSMUST00000228135 533 ntBASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcf11G3X9Z4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm15744-201ENSMUST00000161734 213 ntBASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Gm25517-201ENSMUST00000083865 134 ntBASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcf11G3X9Z4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm11960-201ENSMUST00000122068 925 ntBASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm6407-201ENSMUST00000176468 549 ntBASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm9645-201ENSMUST00000197131 792 ntBASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms