Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.52□□□□□ -0.56
Colca2F8VPY8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Colca2F8VPY8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm14892-201ENSMUST00000117636 267 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm18460-201ENSMUST00000208088 464 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm19640-201ENSMUST00000214849 464 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.52□□□□□ -0.57
Colca2F8VPY8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Colca2F8VPY8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm12948-201ENSMUST00000119406 682 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm10169-201ENSMUST00000121822 348 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm5257-201ENSMUST00000121823 790 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm4034-201ENSMUST00000187674 480 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm6450-201ENSMUST00000200896 574 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm3726-201ENSMUST00000203110 785 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm8574-201ENSMUST00000203207 924 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gm4604-201ENSMUST00000025040 390 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.51□□□□□ -0.57
Colca2F8VPY8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Colca2F8VPY8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms