Protein–RNA interactions for Protein: E9Q8B5

Gm4788, Predicted gene 4788, mousemouse

Predictions only

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4788E9Q8B5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm4788E9Q8B5 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm25076-201ENSMUST00000104098 132 ntBASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm6485-201ENSMUST00000160676 439 ntBASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm4207-201ENSMUST00000173144 960 ntBASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm4788E9Q8B5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm14659-201ENSMUST00000117667 843 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm15207-201ENSMUST00000119259 442 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm38117-201ENSMUST00000194653 939 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm9645-201ENSMUST00000197131 792 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm6649-201ENSMUST00000199743 1165 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.98□□□□□ -0.33
Gm4788E9Q8B5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms