Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm15610-201ENSMUST00000120584 195 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm44551-201ENSMUST00000208804 171 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm45575-201ENSMUST00000210283 548 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.68□□□□□ -0.06
Ube4aE9Q735 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Mir7032-201ENSMUST00000185154 79 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.67□□□□□ -0.06
Ube4aE9Q735 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube4aE9Q735 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm11667-201ENSMUST00000119828 486 ntBASIC14.66□□□□□ -0.06
Ube4aE9Q735 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.66□□□□□ -0.06
Ube4aE9Q735 Gm8815-201ENSMUST00000173809 620 ntBASIC14.66□□□□□ -0.06
Ube4aE9Q735 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms