Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn2B2RVW2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm45575-201ENSMUST00000210283 548 ntBASIC14.16□□□□□ -0.14
Clrn2B2RVW2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.16□□□□□ -0.14
Clrn2B2RVW2 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.16□□□□□ -0.14
Clrn2B2RVW2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn2B2RVW2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm17831-201ENSMUST00000205579 900 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm2517-201ENSMUST00000215651 348 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm5705-201ENSMUST00000066241 711 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Snora73b-201ENSMUST00000083419 205 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn2B2RVW2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Clrn2B2RVW2 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm23912-201ENSMUST00000104687 87 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm11246-201ENSMUST00000120880 345 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clrn2B2RVW2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.14□□□□□ -0.15
Clrn2B2RVW2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms