Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm44506-201ENSMUST00000206278 965 ntBASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Chd6A3KFM7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm37981-201ENSMUST00000194280 535 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm13039-201ENSMUST00000118638 794 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm38233-201ENSMUST00000194259 807 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.85□□□□□ -0.83
Chd6A3KFM7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Chd6A3KFM7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm28686-201ENSMUST00000187404 609 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm18124-201ENSMUST00000210695 706 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 AC192333.3-201ENSMUST00000224041 463 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.84□□□□□ -0.83
Chd6A3KFM7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Chd6A3KFM7 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC9.84□□□□□ -0.83
Chd6A3KFM7 Gm27444-201ENSMUST00000184157 137 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms