Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm24934-201ENSMUST00000103764 111 ntBASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Mir1247-201ENSMUST00000116706 82 ntBASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm27023-201ENSMUST00000182372 285 ntBASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm5950-201ENSMUST00000213337 772 ntBASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm9823-201ENSMUST00000051212 327 ntBASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb1A2AQ07 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm4986-201ENSMUST00000119731 549 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm14832-201ENSMUST00000121289 322 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Tubb1A2AQ07 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb1A2AQ07 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Gm25214-201ENSMUST00000104573 129 ntBASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Gm11531-201ENSMUST00000117614 555 ntBASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.52□□□□□ -0.41
Tubb1A2AQ07 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms