Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf3Q9Z2L7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm11425-201ENSMUST00000119608 498 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm22121-201ENSMUST00000175148 54 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm9396-201ENSMUST00000076703 567 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Crlf3Q9Z2L7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.4□□□□□ -0.42
Crlf3Q9Z2L7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms