Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lhx9Q9WUH2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Gm45598-202ENSMUST00000210719 986 ntBASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lhx9Q9WUH2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm22902-201ENSMUST00000158488 302 ntBASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm25732-201ENSMUST00000175168 60 ntBASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lhx9Q9WUH2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms