Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Gm12058-201ENSMUST00000118614 437 ntBASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Gm13736-201ENSMUST00000119272 253 ntBASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Olfr284-202ENSMUST00000206647 966 ntBASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Prpf40aQ9R1C7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Mir1938-201ENSMUST00000158746 100 ntBASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Gm37489-201ENSMUST00000191883 159 ntBASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Gm18935-201ENSMUST00000212692 664 ntBASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Prpf40aQ9R1C7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm24231-201ENSMUST00000104315 133 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm27023-201ENSMUST00000182372 285 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm27390-201ENSMUST00000184516 176 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf40aQ9R1C7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms