Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Mir7023-201ENSMUST00000185093 64 ntBASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmgn3Q9DCB1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Syt7-204ENSMUST00000223586 1344 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmgn3Q9DCB1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm28760-201ENSMUST00000185995 736 ntBASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms