Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Gm7722-201ENSMUST00000120646 741 ntBASIC16.13■□□□□ 0.17
U2af1Q9D883 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Gm24749-201ENSMUST00000157838 343 ntBASIC16.13■□□□□ 0.17
U2af1Q9D883 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm14277-201ENSMUST00000121195 360 ntBASIC16.12■□□□□ 0.17
U2af1Q9D883 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm5363-201ENSMUST00000211927 938 ntBASIC16.12■□□□□ 0.17
U2af1Q9D883 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.12■□□□□ 0.17
U2af1Q9D883 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.12■□□□□ 0.17
U2af1Q9D883 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
U2af1Q9D883 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
U2af1Q9D883 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
U2af1Q9D883 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Gm14028-201ENSMUST00000117434 479 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Gm4034-201ENSMUST00000187674 480 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 Gm37666-201ENSMUST00000194110 866 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.11■□□□□ 0.17
U2af1Q9D883 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
U2af1Q9D883 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.11■□□□□ 0.17
U2af1Q9D883 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
U2af1Q9D883 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
U2af1Q9D883 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm23912-201ENSMUST00000104687 87 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm16505-201ENSMUST00000179981 232 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm37466-201ENSMUST00000195692 652 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm18711-201ENSMUST00000199341 750 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.1■□□□□ 0.17
U2af1Q9D883 Gm44124-201ENSMUST00000204159 472 ntBASIC16.1■□□□□ 0.17
U2af1Q9D883 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
U2af1Q9D883 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms