Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc47Q9D024 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm24934-201ENSMUST00000103764 111 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm11222-201ENSMUST00000119005 738 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm4034-201ENSMUST00000187674 480 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm5950-201ENSMUST00000213337 772 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm8227-201ENSMUST00000223306 571 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc47Q9D024 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Gm11531-201ENSMUST00000117614 555 ntBASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc47Q9D024 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Gm24830-201ENSMUST00000102024 166 ntBASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc47Q9D024 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms