Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm13315-201ENSMUST00000120376 991 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm9083-201ENSMUST00000120423 819 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm8018-201ENSMUST00000173536 789 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm7653-201ENSMUST00000214567 508 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Gm11814-201ENSMUST00000119515 929 ntBASIC12.63□□□□□ -0.39
Snf8Q9CZ28 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Gm7029-201ENSMUST00000173226 450 ntBASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Gm8652-201ENSMUST00000181363 964 ntBASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Gm18304-201ENSMUST00000189162 546 ntBASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snf8Q9CZ28 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms