Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm18304-201ENSMUST00000189162 546 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm5186-201ENSMUST00000218781 920 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm24136-201ENSMUST00000083374 165 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc3Q9CWU5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Mir1247-201ENSMUST00000116706 82 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm12742-201ENSMUST00000117326 410 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm13342-201ENSMUST00000121055 207 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm27572-201ENSMUST00000183702 255 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm38158-201ENSMUST00000194617 339 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm19309-201ENSMUST00000218295 205 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gm9823-201ENSMUST00000051212 327 ntBASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.79□□□□□ -0.52
Khdc3Q9CWU5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms