Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldnd1Q9CQX5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm3551-201ENSMUST00000190750 664 ntBASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm25201-201ENSMUST00000083093 170 ntBASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm8325-201ENSMUST00000099086 453 ntBASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldnd1Q9CQX5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.52□□□□□ -0.4
Cldnd1Q9CQX5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm25076-201ENSMUST00000104098 132 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm11660-201ENSMUST00000120955 412 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm11980-201ENSMUST00000121445 986 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm12164-201ENSMUST00000121695 551 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm20392-201ENSMUST00000173047 701 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm45594-201ENSMUST00000211717 241 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm9139-201ENSMUST00000218817 700 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldnd1Q9CQX5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldnd1Q9CQX5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms