Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cotl1Q9CQI6 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Cotl1Q9CQI6 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms