Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm12203-201ENSMUST00000118235 598 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm12209-201ENSMUST00000120089 596 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm8810-201ENSMUST00000172895 754 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Ska1Q9CPV1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm16479-201ENSMUST00000121706 932 ntBASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ska1Q9CPV1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ska1Q9CPV1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms