Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Gm10434-201ENSMUST00000101158 471 ntBASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.99□□□□□ -0.17
Trim11Q99PQ2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim11Q99PQ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Map1b-203ENSMUST00000223725 2669 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm24830-201ENSMUST00000102024 166 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm22018-201ENSMUST00000104357 131 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm13570-201ENSMUST00000140763 309 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm43433-201ENSMUST00000196573 481 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Gm26232-201ENSMUST00000083360 166 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim11Q99PQ2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms