Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim33Q99PP7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim33Q99PP7 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.27□□□□□ -0.44
Trim33Q99PP7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm44405-201ENSMUST00000198952 126 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.27□□□□□ -0.45
Trim33Q99PP7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim33Q99PP7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gm13786-201ENSMUST00000122371 333 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Mospd4-201ENSMUST00000180618 576 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gm29396-201ENSMUST00000185659 716 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 Olfr284-202ENSMUST00000206647 966 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.26□□□□□ -0.45
Trim33Q99PP7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim33Q99PP7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms