Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtn4Q99P72 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm27243-201ENSMUST00000183964 521 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm38268-201ENSMUST00000195813 193 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm43133-201ENSMUST00000197472 463 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm44137-201ENSMUST00000203670 367 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm6290-201ENSMUST00000207666 1158 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Gm18935-201ENSMUST00000212692 664 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.3■□□□□ 0.2
Rtn4Q99P72 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtn4Q99P72 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm13341-201ENSMUST00000120780 672 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm12998-201ENSMUST00000122445 789 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm26595-201ENSMUST00000181585 484 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm38014-201ENSMUST00000193349 2612 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Gm37953-201ENSMUST00000195293 1884 ntBASIC16.29■□□□□ 0.2
Rtn4Q99P72 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtn4Q99P72 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtn4Q99P72 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtn4Q99P72 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtn4Q99P72 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtn4Q99P72 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.28■□□□□ 0.2
Rtn4Q99P72 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtn4Q99P72 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms