Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac9Q99N13 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hdac9Q99N13 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac9Q99N13 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac9Q99N13 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac9Q99N13 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm10752-201ENSMUST00000218348 729 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.44□□□□□ -0.1
Hdac9Q99N13 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac9Q99N13 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm9358-201ENSMUST00000183067 927 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm27530-201ENSMUST00000184096 98 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm9463-201ENSMUST00000206707 601 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.43□□□□□ -0.1
Hdac9Q99N13 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdac9Q99N13 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdac9Q99N13 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms