Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm37921-201ENSMUST00000194333 695 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col25a1Q99MQ5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm42433-201ENSMUST00000196806 940 ntBASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm6855-201ENSMUST00000206307 790 ntBASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Gm5805-201ENSMUST00000072779 456 ntBASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col25a1Q99MQ5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm14999-201ENSMUST00000121039 624 ntBASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm15744-201ENSMUST00000161734 213 ntBASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm17827-201ENSMUST00000211825 742 ntBASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col25a1Q99MQ5 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col25a1Q99MQ5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms