Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkd1Q99MH6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm11478-201ENSMUST00000117851 599 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm7029-201ENSMUST00000173226 450 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm6007-201ENSMUST00000208170 823 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm10268-201ENSMUST00000085340 555 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkd1Q99MH6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.56□□□□□ -0.56
Nkd1Q99MH6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm9022-201ENSMUST00000182482 992 ntBASIC11.56□□□□□ -0.56
Nkd1Q99MH6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkd1Q99MH6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkd1Q99MH6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms