Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm44405-201ENSMUST00000198952 126 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm43818-201ENSMUST00000200605 466 ntBASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk5rap3Q99LM2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Gm11478-201ENSMUST00000117851 599 ntBASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap3Q99LM2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap3Q99LM2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap3Q99LM2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap3Q99LM2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap3Q99LM2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap3Q99LM2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms