Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm15004-201ENSMUST00000119192 630 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm15207-201ENSMUST00000119259 442 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm5419-201ENSMUST00000119301 527 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm3551-201ENSMUST00000190750 664 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm5298-201ENSMUST00000201122 892 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.11■□□□□ 0.01
RtcbQ99LF4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm14247-201ENSMUST00000120950 237 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm22877-201ENSMUST00000175451 105 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm19009-201ENSMUST00000223072 823 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.1■□□□□ 0.01
RtcbQ99LF4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RtcbQ99LF4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.09■□□□□ 0.01
RtcbQ99LF4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm13600-201ENSMUST00000117949 744 ntBASIC15.09■□□□□ 0.01
RtcbQ99LF4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm45120-201ENSMUST00000208880 408 ntBASIC15.09■□□□□ 0.01
RtcbQ99LF4 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.09■□□□□ 0.01
RtcbQ99LF4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.09■□□□□ 0.01
RtcbQ99LF4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RtcbQ99LF4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms