Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm13342-201ENSMUST00000121055 207 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm1335-201ENSMUST00000121653 386 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm44405-201ENSMUST00000198952 126 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm39404-201ENSMUST00000216350 313 ntBASIC11.2□□□□□ -0.62
Lims1Q99JW4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Mir1982-201ENSMUST00000157368 74 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm45925-201ENSMUST00000218882 744 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.19□□□□□ -0.62
Lims1Q99JW4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lims1Q99JW4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lims1Q99JW4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms